Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC1O00299 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
CLIC1O00299 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC1O00299 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLIC1O00299 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLIC1O00299 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLIC1O00299 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.28■□□□□ 0.2
CLIC1O00299 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CLIC1O00299 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.28■□□□□ 0.2
CLIC1O00299 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.28■□□□□ 0.2
CLIC1O00299 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CLIC1O00299 AC211429.1-201ENST00000415277 523 ntBASIC16.28■□□□□ 0.2
CLIC1O00299 AL845331.1-201ENST00000424978 1190 ntBASIC16.28■□□□□ 0.2
CLIC1O00299 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLIC1O00299 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.28■□□□□ 0.2
CLIC1O00299 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.28■□□□□ 0.2
CLIC1O00299 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CLIC1O00299 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 AL353593.2-201ENST00000602529 1483 ntBASIC16.28■□□□□ 0.2
CLIC1O00299 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC1O00299 AL135999.2-201ENST00000622438 1686 ntBASIC16.27■□□□□ 0.2
CLIC1O00299 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.27■□□□□ 0.2
CLIC1O00299 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.27■□□□□ 0.2
CLIC1O00299 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.27■□□□□ 0.2
CLIC1O00299 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.27■□□□□ 0.2
CLIC1O00299 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CLIC1O00299 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLIC1O00299 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
CLIC1O00299 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLIC1O00299 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CLIC1O00299 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 AC011498.5-201ENST00000592027 486 ntBASIC16.27■□□□□ 0.2
CLIC1O00299 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.27■□□□□ 0.2
CLIC1O00299 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLIC1O00299 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.27■□□□□ 0.2
CLIC1O00299 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLIC1O00299 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.27■□□□□ 0.19
CLIC1O00299 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.27■□□□□ 0.19
CLIC1O00299 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CLIC1O00299 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLIC1O00299 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLIC1O00299 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.27■□□□□ 0.19
CLIC1O00299 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLIC1O00299 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
CLIC1O00299 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLIC1O00299 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLIC1O00299 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLIC1O00299 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLIC1O00299 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.26■□□□□ 0.19
CLIC1O00299 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CLIC1O00299 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLIC1O00299 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLIC1O00299 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLIC1O00299 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.26■□□□□ 0.19
CLIC1O00299 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLIC1O00299 AC092171.3-201ENST00000610122 2651 ntBASIC16.26■□□□□ 0.19
CLIC1O00299 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.26■□□□□ 0.19
CLIC1O00299 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLIC1O00299 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CLIC1O00299 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLIC1O00299 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLIC1O00299 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLIC1O00299 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CLIC1O00299 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms