Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 AC073592.4-201ENST00000623827 446 ntBASIC17.24■□□□□ 0.35
CFAP99D6REC4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 AC046158.3-201ENST00000624947 2558 ntBASIC17.24■□□□□ 0.35
CFAP99D6REC4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.24■□□□□ 0.35
CFAP99D6REC4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CFAP99D6REC4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 AL356309.3-201ENST00000624132 1934 ntBASIC17.23■□□□□ 0.35
CFAP99D6REC4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 AC004870.1-201ENST00000315132 882 ntBASIC17.23■□□□□ 0.35
CFAP99D6REC4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.23■□□□□ 0.35
CFAP99D6REC4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CFAP99D6REC4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.23■□□□□ 0.35
CFAP99D6REC4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 AKR1C7P-201ENST00000305623 895 ntBASIC17.22■□□□□ 0.35
CFAP99D6REC4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 AC008894.3-201ENST00000624324 3103 ntBASIC17.22■□□□□ 0.35
CFAP99D6REC4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CFAP99D6REC4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CFAP99D6REC4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CFAP99D6REC4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CFAP99D6REC4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms