Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 SCARNA2-201ENST00000458748 420 ntBASIC15.24■□□□□ 0.03
NPIPB4C9JG80 BX005266.1-201ENST00000473402 457 ntBASIC15.24■□□□□ 0.03
NPIPB4C9JG80 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 PRELID1P1-202ENST00000567272 903 ntBASIC15.24■□□□□ 0.03
NPIPB4C9JG80 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 MTDHP3-201ENST00000594186 672 ntBASIC15.24■□□□□ 0.03
NPIPB4C9JG80 TERC-201ENST00000602385 541 ntBASIC15.24■□□□□ 0.03
NPIPB4C9JG80 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 SAPCD2P3-201ENST00000455031 850 ntBASIC15.23■□□□□ 0.03
NPIPB4C9JG80 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 LINC01711-201ENST00000598340 967 ntBASIC15.23■□□□□ 0.03
NPIPB4C9JG80 AC008608.2-201ENST00000606089 416 ntBASIC15.23■□□□□ 0.03
NPIPB4C9JG80 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NPIPB4C9JG80 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 AC139887.3-201ENST00000568585 713 ntBASIC15.22■□□□□ 0.03
NPIPB4C9JG80 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPB4C9JG80 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms