Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C4orf47A7E2U8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 BX276092.7-203ENST00000637198 1536 ntBASIC16.81■□□□□ 0.28
C4orf47A7E2U8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 GPS2P2-201ENST00000430745 888 ntBASIC16.81■□□□□ 0.28
C4orf47A7E2U8 AC140658.5-201ENST00000438532 169 ntBASIC16.81■□□□□ 0.28
C4orf47A7E2U8 CRB3P1-201ENST00000449338 276 ntBASIC16.81■□□□□ 0.28
C4orf47A7E2U8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 CR383656.12-201ENST00000549567 513 ntBASIC16.81■□□□□ 0.28
C4orf47A7E2U8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 AC116407.2-201ENST00000613639 860 ntBASIC16.81■□□□□ 0.28
C4orf47A7E2U8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 AC005332.8-201ENST00000622750 2735 ntBASIC16.81■□□□□ 0.28
C4orf47A7E2U8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C4orf47A7E2U8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 ACTG1P4-201ENST00000425123 1122 ntBASIC16.8■□□□□ 0.28
C4orf47A7E2U8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 AL135744.1-201ENST00000565098 629 ntBASIC16.8■□□□□ 0.28
C4orf47A7E2U8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 AL390961.4-201ENST00000623958 2535 ntBASIC16.8■□□□□ 0.28
C4orf47A7E2U8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 AL133373.2-201ENST00000623187 2828 ntBASIC16.8■□□□□ 0.28
C4orf47A7E2U8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 AC008677.1-201ENST00000519230 1561 ntBASIC16.8■□□□□ 0.28
C4orf47A7E2U8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C4orf47A7E2U8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C4orf47A7E2U8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms