Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 INO80E-210ENST00000567705 880 ntTSL 3 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC24.56■■□□□ 1.52
CCDC144AA2RUR9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 GATB-205ENST00000508611 605 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC144AA2RUR9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 AL645939.2-201ENST00000427340 991 ntBASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 FAM86C2P-203ENST00000528684 1004 ntBASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 FST-202ENST00000396947 2538 ntTSL 5 BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC144AA2RUR9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 RNU1-129P-201ENST00000384064 167 ntBASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 SPDYE11-202ENST00000450699 704 ntBASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 MTRF1LP2-201ENST00000506027 1122 ntBASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 SPDYE9P-201ENST00000570642 692 ntBASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 MIR3909-201ENST00000579518 119 ntBASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 U1.21-201ENST00000580816 167 ntBASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 SPDYE10P-202ENST00000612005 668 ntBASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 SPDYE8P-202ENST00000612377 668 ntBASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CCDC144AA2RUR9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms