Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.92□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC073648.2-201ENST00000510116 352 ntBASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 REXO1L11P-201ENST00000620964 1927 ntBASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 RBM17P3-201ENST00000417687 1192 ntBASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC011467.2-201ENST00000598425 242 ntBASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC120114.3-201ENST00000611923 658 ntBASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AL355877.3-201ENST00000622820 899 ntBASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TP73-AS1-207ENST00000624167 988 ntBASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC011676.5-201ENST00000624864 2660 ntBASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 INTS4P1-201ENST00000438455 1935 ntBASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.9□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TCRBV4S1A1TA0A5B7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TCRBV4S1A1TA0A5B7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.19
TCRBV4S1A1TA0A5B7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TCRBV4S1A1TA0A5B7 HLA-A-201ENST00000376802 1334 ntBASIC13.9□□□□□ -0.19
TCRBV4S1A1TA0A5B7 AC124067.4-201ENST00000519691 2379 ntBASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRBV4S1A1TA0A5B7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms