Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DRB4X5D2U9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AC022211.2-201ENST00000585075 2527 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 NSUN5P1-202ENST00000421140 1535 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 NSUN5P2-203ENST00000457352 1529 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 UPK3BP1-201ENST00000428678 509 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 IGHV3-52-201ENST00000519770 353 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AP000867.3-201ENST00000524675 377 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AC074051.2-201ENST00000565115 352 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AC012615.1-201ENST00000565797 1299 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AC111152.3-201ENST00000569699 673 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AC011467.2-201ENST00000598425 242 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AC092119.3-201ENST00000612618 583 ntBASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DRB4X5D2U9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 AP001094.4-201ENST00000579008 2176 ntBASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 AC096582.2-201ENST00000510860 516 ntBASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
HLA-DRB4X5D2U9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms