Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 FGFR3P6-201ENST00000457012 610 ntBASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 SCARNA2-201ENST00000458748 420 ntBASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 AF238378.1-201ENST00000526806 358 ntBASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB13Q9Y5F0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 AC080080.1-201ENST00000625121 2420 ntBASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 AL035696.2-201ENST00000407941 709 ntBASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 AL450487.1-201ENST00000426799 995 ntBASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 AL022326.1-202ENST00000641533 845 ntBASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 AC093525.9-201ENST00000624961 1746 ntBASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB13Q9Y5F0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 AC004817.3-201ENST00000602957 2129 ntBASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 BX005266.1-201ENST00000473402 457 ntBASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 KRT126P-201ENST00000549467 1181 ntBASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB13Q9Y5F0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms