Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 NBPF21P-201ENST00000425093 1451 ntBASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 AC079781.5-202ENST00000641784 3743 ntBASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CHTOPQ9Y3Y2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 AC016396.2-201ENST00000562575 1417 ntBASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 CYP2T1P-202ENST00000641596 2535 ntBASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 AC022898.2-201ENST00000616822 1312 ntBASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 AC132872.4-202ENST00000622924 2756 ntBASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CHTOPQ9Y3Y2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 AC007950.2-201ENST00000615045 2347 ntBASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 AC105036.2-201ENST00000569468 176 ntBASIC12.44□□□□□ -0.42
CHTOPQ9Y3Y2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms