Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP25Q9UHP3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP25Q9UHP3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP25Q9UHP3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.83■□□□□ 0.77
USP25Q9UHP3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP25Q9UHP3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP25Q9UHP3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP25Q9UHP3 LYSMD4-203ENST00000378904 2122 ntBASIC19.83■□□□□ 0.77
USP25Q9UHP3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
USP25Q9UHP3 AL139327.4-201ENST00000612362 153 ntBASIC19.83■□□□□ 0.77
USP25Q9UHP3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.83■□□□□ 0.77
USP25Q9UHP3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP25Q9UHP3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP25Q9UHP3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
USP25Q9UHP3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP25Q9UHP3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP25Q9UHP3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP25Q9UHP3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
USP25Q9UHP3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 AC116353.5-201ENST00000638148 1699 ntBASIC19.82■□□□□ 0.76
USP25Q9UHP3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 GUSBP12-201ENST00000513727 720 ntBASIC19.82■□□□□ 0.76
USP25Q9UHP3 AC022616.7-201ENST00000525383 220 ntBASIC19.82■□□□□ 0.76
USP25Q9UHP3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.82■□□□□ 0.76
USP25Q9UHP3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
USP25Q9UHP3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP25Q9UHP3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 RNF216P1-203ENST00000404404 2427 ntBASIC19.81■□□□□ 0.76
USP25Q9UHP3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 AL671277.2-201ENST00000458060 996 ntBASIC19.81■□□□□ 0.76
USP25Q9UHP3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.81■□□□□ 0.76
USP25Q9UHP3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 HYMAI-201ENST00000635591 3347 ntBASIC19.81■□□□□ 0.76
USP25Q9UHP3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
USP25Q9UHP3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP25Q9UHP3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms