Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMBRD1Q9NUN5 AL513477.1-201ENST00000602865 2407 ntBASIC19.83■□□□□ 0.76
LMBRD1Q9NUN5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
LMBRD1Q9NUN5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMBRD1Q9NUN5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LMBRD1Q9NUN5 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMBRD1Q9NUN5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LMBRD1Q9NUN5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 IGHV3-52-201ENST00000519770 353 ntBASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LMBRD1Q9NUN5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 AC141257.4-201ENST00000634557 245 ntBASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 AC136944.6-201ENST00000634818 245 ntBASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 AL049757.1-201ENST00000616842 1596 ntBASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMBRD1Q9NUN5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 AC007967.3-201ENST00000434308 558 ntBASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 NAPSB-206ENST00000562112 1266 ntBASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.8■□□□□ 0.76
LMBRD1Q9NUN5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms