Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 AC006538.1-201ENST00000567905 1585 ntBASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CDC42SE1Q9NRR8 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 AC046185.3-201ENST00000623228 1824 ntBASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC8.77□□□□□ -1
CDC42SE1Q9NRR8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 AMT-221ENST00000538581 2038 ntTSL 2 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC8.77□□□□□ -1.01
CDC42SE1Q9NRR8 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms