Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDLIM7Q9NR12 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 AL627223.1-201ENST00000416693 442 ntBASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 AC087641.1-201ENST00000557561 1021 ntBASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
PDLIM7Q9NR12 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 AL138688.1-201ENST00000624851 1594 ntBASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 INGX-202ENST00000489074 768 ntBASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 AL590787.1-201ENST00000568856 1315 ntBASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.2■□□□□ 0.66
PDLIM7Q9NR12 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 AC005225.4-201ENST00000557330 545 ntBASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.19■□□□□ 0.66
PDLIM7Q9NR12 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDLIM7Q9NR12 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms