Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 AC005229.1-201ENST00000392885 409 ntBASIC15.83■□□□□ 0.12
CHD8Q9HCK8 BOLA2P3-201ENST00000404566 256 ntBASIC15.83■□□□□ 0.12
CHD8Q9HCK8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 AL118558.3-201ENST00000607414 1079 ntBASIC15.83■□□□□ 0.12
CHD8Q9HCK8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.83■□□□□ 0.12
CHD8Q9HCK8 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 AL161938.1-201ENST00000569833 2180 ntBASIC15.83■□□□□ 0.12
CHD8Q9HCK8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CHD8Q9HCK8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 FAM21FP-201ENST00000426241 1131 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AL353705.2-201ENST00000428243 662 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 RARRES2P9-201ENST00000565168 469 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 PHGDH-209ENST00000641074 1780 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AC142381.1-201ENST00000426099 345 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 C2orf69P2-201ENST00000562032 1123 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AC010319.3-201ENST00000597028 470 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHD8Q9HCK8 TMEM198B-204ENST00000484016 896 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 DOC2GP-202ENST00000514950 1163 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 AC055876.2-201ENST00000531834 546 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 U62317.3-201ENST00000608319 855 ntBASIC15.82■□□□□ 0.12
CHD8Q9HCK8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 AC105233.2-201ENST00000523697 349 ntBASIC15.81■□□□□ 0.12
CHD8Q9HCK8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 AF228730.5-201ENST00000530288 346 ntBASIC15.81■□□□□ 0.12
CHD8Q9HCK8 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 AL365330.1-201ENST00000607459 531 ntBASIC15.81■□□□□ 0.12
CHD8Q9HCK8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.81■□□□□ 0.12
CHD8Q9HCK8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms