Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CBX8Q9HC52 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CBX8Q9HC52 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 KRT17P2-201ENST00000300992 1314 ntBASIC19.31■□□□□ 0.68
CBX8Q9HC52 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 HLA-A-202ENST00000376806 1854 ntBASIC19.31■□□□□ 0.68
CBX8Q9HC52 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 AL138966.2-201ENST00000621997 464 ntBASIC19.31■□□□□ 0.68
CBX8Q9HC52 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CBX8Q9HC52 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CBX8Q9HC52 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.3■□□□□ 0.68
CBX8Q9HC52 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 FRMD8P1-201ENST00000440433 1524 ntBASIC19.3■□□□□ 0.68
CBX8Q9HC52 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CBX8Q9HC52 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CBX8Q9HC52 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 SPDYE15P-201ENST00000424157 909 ntBASIC19.29■□□□□ 0.68
CBX8Q9HC52 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 IGHV3-52-201ENST00000519770 353 ntBASIC19.29■□□□□ 0.68
CBX8Q9HC52 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CBX8Q9HC52 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CBX8Q9HC52 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms