Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL591684.3-201ENST00000605187 298 ntBASIC16.52■□□□□ 0.24
BRF2Q9HAW0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
BRF2Q9HAW0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
BRF2Q9HAW0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.52■□□□□ 0.23
BRF2Q9HAW0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
BRF2Q9HAW0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
BRF2Q9HAW0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
BRF2Q9HAW0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
BRF2Q9HAW0 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
BRF2Q9HAW0 AC079776.2-201ENST00000641154 1609 ntBASIC16.52■□□□□ 0.23
BRF2Q9HAW0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 FRMD8P1-201ENST00000440433 1524 ntBASIC16.51■□□□□ 0.23
BRF2Q9HAW0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 AC106886.4-201ENST00000623557 2502 ntBASIC16.51■□□□□ 0.23
BRF2Q9HAW0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 NUS1P1-201ENST00000446295 882 ntBASIC16.51■□□□□ 0.23
BRF2Q9HAW0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 AC093458.2-201ENST00000623150 629 ntBASIC16.51■□□□□ 0.23
BRF2Q9HAW0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
BRF2Q9HAW0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 AC005915.1-201ENST00000624912 2018 ntBASIC16.5■□□□□ 0.23
BRF2Q9HAW0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 AP005117.1-201ENST00000584346 1413 ntBASIC16.5■□□□□ 0.23
BRF2Q9HAW0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.5■□□□□ 0.23
BRF2Q9HAW0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.49■□□□□ 0.23
BRF2Q9HAW0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms