Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 AC012313.1-201ENST00000593393 3059 ntBASIC18.19■□□□□ 0.5
LHX5Q9H2C1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LHX5Q9H2C1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 PRORSD1P-202ENST00000563365 2154 ntBASIC18.18■□□□□ 0.5
LHX5Q9H2C1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 TP73-AS1-207ENST00000624167 988 ntBASIC18.18■□□□□ 0.5
LHX5Q9H2C1 AC107918.4-202ENST00000641623 219 ntBASIC18.18■□□□□ 0.5
LHX5Q9H2C1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LHX5Q9H2C1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 AP002414.1-201ENST00000391405 1147 ntBASIC18.17■□□□□ 0.5
LHX5Q9H2C1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 LAGE3P1-201ENST00000425356 484 ntBASIC18.17■□□□□ 0.5
LHX5Q9H2C1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 RNPS1P1-201ENST00000507437 918 ntBASIC18.17■□□□□ 0.5
LHX5Q9H2C1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 AC022211.2-201ENST00000585075 2527 ntBASIC18.17■□□□□ 0.5
LHX5Q9H2C1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LHX5Q9H2C1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX5Q9H2C1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LHX5Q9H2C1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms