Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2OQ9C0C9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 RN7SL589P-201ENST00000481268 310 ntBASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 SERBP1P5-201ENST00000510079 1181 ntBASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 AL606495.2-201ENST00000605867 535 ntBASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE2OQ9C0C9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 IGHV3-71-201ENST00000523324 359 ntBASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 AC099522.2-201ENST00000607001 744 ntBASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 AL158211.3-201ENST00000607385 239 ntBASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 WIZP1-201ENST00000531444 2299 ntBASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBE2OQ9C0C9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
UBE2OQ9C0C9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.94■□□□□ 0.62
UBE2OQ9C0C9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2OQ9C0C9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2OQ9C0C9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2OQ9C0C9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.94■□□□□ 0.62
UBE2OQ9C0C9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
UBE2OQ9C0C9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2OQ9C0C9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBE2OQ9C0C9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms