Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 GPAT2P1-201ENST00000444924 1672 ntBASIC14.03□□□□□ -0.16
NKX6-2Q9C056 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NKX6-2Q9C056 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 AC022532.1-201ENST00000624563 1728 ntBASIC14.02□□□□□ -0.16
NKX6-2Q9C056 AC116353.5-201ENST00000638148 1699 ntBASIC14.02□□□□□ -0.16
NKX6-2Q9C056 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NKX6-2Q9C056 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 SOX15-203ENST00000570788 1093 ntBASIC14.02□□□□□ -0.17
NKX6-2Q9C056 MIR4758-201ENST00000577688 71 ntBASIC14.02□□□□□ -0.17
NKX6-2Q9C056 AC131212.4-201ENST00000623606 975 ntBASIC14.02□□□□□ -0.17
NKX6-2Q9C056 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 AC073347.1-201ENST00000421633 2643 ntBASIC14.02□□□□□ -0.17
NKX6-2Q9C056 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 AL359258.3-201ENST00000622910 2331 ntBASIC14.02□□□□□ -0.17
NKX6-2Q9C056 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NKX6-2Q9C056 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 AC004911.1-201ENST00000416316 871 ntBASIC14.01□□□□□ -0.17
NKX6-2Q9C056 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.01□□□□□ -0.17
NKX6-2Q9C056 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms