Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 IFNL4P1-201ENST00000607083 540 ntBASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
FOXP3Q9BZS1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 AL603756.1-201ENST00000606511 2163 ntBASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 TOB2P1-201ENST00000469761 992 ntBASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
FOXP3Q9BZS1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
FOXP3Q9BZS1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 IGHGP-201ENST00000390555 1178 ntBASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 NUS1P1-201ENST00000446295 882 ntBASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 AC068472.1-201ENST00000474589 881 ntBASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.83■□□□□ 0.44
FOXP3Q9BZS1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 DRAXINP1-201ENST00000437611 948 ntBASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 FDX1P1-201ENST00000449115 551 ntBASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 FOSL1P1-201ENST00000511041 816 ntBASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.82■□□□□ 0.44
FOXP3Q9BZS1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms