Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRC3Q9BY71 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 LYSMD4-203ENST00000378904 2122 ntBASIC17.96■□□□□ 0.47
LRRC3Q9BY71 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 ACTG1P14-201ENST00000446382 1122 ntBASIC17.96■□□□□ 0.47
LRRC3Q9BY71 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 AP002472.1-201ENST00000577490 586 ntBASIC17.96■□□□□ 0.47
LRRC3Q9BY71 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 AC027612.4-201ENST00000605371 583 ntBASIC17.96■□□□□ 0.47
LRRC3Q9BY71 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRC3Q9BY71 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
LRRC3Q9BY71 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
LRRC3Q9BY71 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 HCG11-201ENST00000411553 5696 ntBASIC17.95■□□□□ 0.46
LRRC3Q9BY71 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 SLC25A6P5-201ENST00000435663 894 ntBASIC17.95■□□□□ 0.46
LRRC3Q9BY71 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRC3Q9BY71 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 AC092919.2-201ENST00000623631 1645 ntBASIC17.94■□□□□ 0.46
LRRC3Q9BY71 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 AC068137.2-201ENST00000605408 478 ntBASIC17.94■□□□□ 0.46
LRRC3Q9BY71 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.94■□□□□ 0.46
LRRC3Q9BY71 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.93■□□□□ 0.46
LRRC3Q9BY71 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms