Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 FAAHP1-202ENST00000446499 1238 ntBASIC20.89■□□□□ 0.93
SALL3Q9BXA9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 AC073648.2-201ENST00000510116 352 ntBASIC20.89■□□□□ 0.93
SALL3Q9BXA9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 AC006557.2-201ENST00000592985 1240 ntBASIC20.89■□□□□ 0.93
SALL3Q9BXA9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 AL049840.3-201ENST00000602669 611 ntBASIC20.89■□□□□ 0.93
SALL3Q9BXA9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 AC002310.6-201ENST00000624451 1377 ntBASIC20.89■□□□□ 0.93
SALL3Q9BXA9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.89■□□□□ 0.93
SALL3Q9BXA9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SALL3Q9BXA9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 MRPL3P1-201ENST00000400109 1033 ntBASIC20.88■□□□□ 0.93
SALL3Q9BXA9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 FAM215A-202ENST00000632077 792 ntBASIC20.88■□□□□ 0.93
SALL3Q9BXA9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 AP002414.3-201ENST00000589352 1468 ntBASIC20.88■□□□□ 0.93
SALL3Q9BXA9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SALL3Q9BXA9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 AL160237.2-201ENST00000556165 472 ntBASIC20.87■□□□□ 0.93
SALL3Q9BXA9 SLC25A6P4-201ENST00000586535 553 ntBASIC20.87■□□□□ 0.93
SALL3Q9BXA9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SALL3Q9BXA9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SALL3Q9BXA9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SALL3Q9BXA9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL3Q9BXA9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL3Q9BXA9 AC004870.1-201ENST00000315132 882 ntBASIC20.86■□□□□ 0.93
SALL3Q9BXA9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SALL3Q9BXA9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.86■□□□□ 0.93
SALL3Q9BXA9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms