Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 AC073508.3-201ENST00000619697 1419 ntBASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.42□□□□□ -0.26
NDUFAF3Q9BU61 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 DUX4L26-201ENST00000489078 1255 ntBASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 FAM87A-204ENST00000613235 858 ntBASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 AC006449.5-201ENST00000610658 2098 ntBASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFAF3Q9BU61 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 CYP2T1P-202ENST00000641596 2535 ntBASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFAF3Q9BU61 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms