Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EBF4Q9BQW3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 AC022188.1-201ENST00000620960 1664 ntBASIC16.85■□□□□ 0.29
EBF4Q9BQW3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 COX5BP2-201ENST00000392354 334 ntBASIC16.85■□□□□ 0.29
EBF4Q9BQW3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 EGFEM1P-202ENST00000431685 1563 ntBASIC16.85■□□□□ 0.29
EBF4Q9BQW3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.85■□□□□ 0.29
EBF4Q9BQW3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 HLA-A-202ENST00000376806 1854 ntBASIC16.84■□□□□ 0.29
EBF4Q9BQW3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 AC008550.1-201ENST00000511500 884 ntBASIC16.84■□□□□ 0.29
EBF4Q9BQW3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
EBF4Q9BQW3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EBF4Q9BQW3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
EBF4Q9BQW3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
EBF4Q9BQW3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
EBF4Q9BQW3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
EBF4Q9BQW3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EBF4Q9BQW3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms