Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.14□□□□□ -0.31
VGLL1Q99990 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.14□□□□□ -0.31
VGLL1Q99990 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
VGLL1Q99990 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.14□□□□□ -0.31
VGLL1Q99990 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
VGLL1Q99990 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VGLL1Q99990 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
VGLL1Q99990 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.13□□□□□ -0.31
VGLL1Q99990 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.13□□□□□ -0.31
VGLL1Q99990 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 LINC02012-201ENST00000608206 1725 ntBASIC13.13□□□□□ -0.31
VGLL1Q99990 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.13□□□□□ -0.31
VGLL1Q99990 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 AC092053.1-201ENST00000605787 1936 ntBASIC13.13□□□□□ -0.31
VGLL1Q99990 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
VGLL1Q99990 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VGLL1Q99990 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VGLL1Q99990 AC079328.2-201ENST00000561241 3354 ntBASIC13.13□□□□□ -0.31
VGLL1Q99990 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
VGLL1Q99990 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.13□□□□□ -0.31
VGLL1Q99990 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.13□□□□□ -0.31
VGLL1Q99990 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.13□□□□□ -0.31
VGLL1Q99990 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 STARP1-201ENST00000397973 869 ntBASIC13.13□□□□□ -0.31
VGLL1Q99990 AC096633.1-201ENST00000422446 749 ntBASIC13.13□□□□□ -0.31
VGLL1Q99990 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
VGLL1Q99990 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.13□□□□□ -0.31
VGLL1Q99990 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.13□□□□□ -0.31
VGLL1Q99990 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
VGLL1Q99990 AC011558.1-201ENST00000623459 338 ntBASIC13.13□□□□□ -0.31
VGLL1Q99990 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.13□□□□□ -0.31
VGLL1Q99990 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
VGLL1Q99990 AC093525.9-201ENST00000624961 1746 ntBASIC13.13□□□□□ -0.31
VGLL1Q99990 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.13□□□□□ -0.31
VGLL1Q99990 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
VGLL1Q99990 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
VGLL1Q99990 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
VGLL1Q99990 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
VGLL1Q99990 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.13□□□□□ -0.31
VGLL1Q99990 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
VGLL1Q99990 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.13□□□□□ -0.31
VGLL1Q99990 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.12□□□□□ -0.31
VGLL1Q99990 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.12□□□□□ -0.31
VGLL1Q99990 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
VGLL1Q99990 AC087499.1-201ENST00000418141 1075 ntBASIC13.12□□□□□ -0.31
VGLL1Q99990 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.12□□□□□ -0.31
VGLL1Q99990 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.12□□□□□ -0.31
VGLL1Q99990 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms