Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SMOQ99835 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SMOQ99835 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.05■□□□□ 0.48
SMOQ99835 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.05■□□□□ 0.48
SMOQ99835 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.05■□□□□ 0.48
SMOQ99835 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SMOQ99835 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.05■□□□□ 0.48
SMOQ99835 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SMOQ99835 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.04■□□□□ 0.48
SMOQ99835 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.04■□□□□ 0.48
SMOQ99835 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SMOQ99835 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.04■□□□□ 0.48
SMOQ99835 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.04■□□□□ 0.48
SMOQ99835 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.04■□□□□ 0.48
SMOQ99835 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SMOQ99835 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.04■□□□□ 0.48
SMOQ99835 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.04■□□□□ 0.48
SMOQ99835 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.04■□□□□ 0.48
SMOQ99835 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SMOQ99835 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.04■□□□□ 0.48
SMOQ99835 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SMOQ99835 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
SMOQ99835 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMOQ99835 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.03■□□□□ 0.48
SMOQ99835 PMS2P7-201ENST00000506558 1336 ntBASIC18.03■□□□□ 0.48
SMOQ99835 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMOQ99835 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMOQ99835 AL023806.1-201ENST00000603994 1649 ntBASIC18.03■□□□□ 0.48
SMOQ99835 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMOQ99835 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
SMOQ99835 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.03■□□□□ 0.48
SMOQ99835 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SMOQ99835 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SMOQ99835 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
SMOQ99835 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.03■□□□□ 0.48
SMOQ99835 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.03■□□□□ 0.48
SMOQ99835 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SMOQ99835 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.03■□□□□ 0.48
SMOQ99835 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.03■□□□□ 0.48
SMOQ99835 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SMOQ99835 AL645608.8-201ENST00000606034 2086 ntBASIC18.03■□□□□ 0.48
SMOQ99835 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SMOQ99835 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SMOQ99835 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMOQ99835 AC002310.6-201ENST00000624451 1377 ntBASIC18.03■□□□□ 0.48
SMOQ99835 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMOQ99835 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SMOQ99835 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SMOQ99835 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.03■□□□□ 0.48
SMOQ99835 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.02■□□□□ 0.48
SMOQ99835 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SMOQ99835 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SMOQ99835 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.02■□□□□ 0.48
SMOQ99835 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.02■□□□□ 0.48
SMOQ99835 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.02■□□□□ 0.48
SMOQ99835 RNA5SP416-201ENST00000516838 111 ntBASIC18.02■□□□□ 0.48
SMOQ99835 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.02■□□□□ 0.48
SMOQ99835 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.02■□□□□ 0.48
SMOQ99835 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.02■□□□□ 0.48
SMOQ99835 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.02■□□□□ 0.48
SMOQ99835 LINC02012-201ENST00000608206 1725 ntBASIC18.02■□□□□ 0.48
SMOQ99835 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.02■□□□□ 0.48
SMOQ99835 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SMOQ99835 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms