Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.28□□□□□ -0.12
S1PR3Q99500 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.28□□□□□ -0.12
S1PR3Q99500 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
S1PR3Q99500 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
S1PR3Q99500 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.28□□□□□ -0.12
S1PR3Q99500 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.28□□□□□ -0.12
S1PR3Q99500 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.28□□□□□ -0.12
S1PR3Q99500 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.28□□□□□ -0.12
S1PR3Q99500 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
S1PR3Q99500 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.28□□□□□ -0.12
S1PR3Q99500 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.28□□□□□ -0.12
S1PR3Q99500 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.28□□□□□ -0.12
S1PR3Q99500 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
S1PR3Q99500 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.28□□□□□ -0.12
S1PR3Q99500 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
S1PR3Q99500 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
S1PR3Q99500 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
S1PR3Q99500 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
S1PR3Q99500 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.27□□□□□ -0.12
S1PR3Q99500 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.27□□□□□ -0.12
S1PR3Q99500 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
S1PR3Q99500 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
S1PR3Q99500 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
S1PR3Q99500 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.27□□□□□ -0.12
S1PR3Q99500 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
S1PR3Q99500 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
S1PR3Q99500 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.27□□□□□ -0.12
S1PR3Q99500 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
S1PR3Q99500 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.27□□□□□ -0.13
S1PR3Q99500 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.27□□□□□ -0.13
S1PR3Q99500 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
S1PR3Q99500 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
S1PR3Q99500 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.27□□□□□ -0.13
S1PR3Q99500 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.27□□□□□ -0.13
S1PR3Q99500 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.27□□□□□ -0.13
S1PR3Q99500 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
S1PR3Q99500 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
S1PR3Q99500 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
S1PR3Q99500 AP002414.4-201ENST00000589764 1148 ntBASIC14.27□□□□□ -0.13
S1PR3Q99500 Z69720.1-201ENST00000601483 472 ntBASIC14.27□□□□□ -0.13
S1PR3Q99500 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.27□□□□□ -0.13
S1PR3Q99500 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.27□□□□□ -0.13
S1PR3Q99500 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.27□□□□□ -0.13
S1PR3Q99500 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
S1PR3Q99500 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
S1PR3Q99500 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
S1PR3Q99500 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
S1PR3Q99500 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.26□□□□□ -0.13
S1PR3Q99500 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
S1PR3Q99500 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
S1PR3Q99500 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms