Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF2Q99496 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF2Q99496 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF2Q99496 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.81□□□□□ -0.2
RNF2Q99496 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.81□□□□□ -0.2
RNF2Q99496 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RNF2Q99496 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF2Q99496 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF2Q99496 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RNF2Q99496 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF2Q99496 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RNF2Q99496 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF2Q99496 AC112907.2-201ENST00000448639 330 ntBASIC13.8□□□□□ -0.2
RNF2Q99496 AC092597.1-201ENST00000487352 616 ntBASIC13.8□□□□□ -0.2
RNF2Q99496 AC063952.2-201ENST00000498792 1227 ntBASIC13.8□□□□□ -0.2
RNF2Q99496 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF2Q99496 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF2Q99496 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF2Q99496 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF2Q99496 AC009949.1-201ENST00000623048 1830 ntBASIC13.8□□□□□ -0.2
RNF2Q99496 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RNF2Q99496 LINC00167-201ENST00000530583 1419 ntBASIC13.8□□□□□ -0.2
RNF2Q99496 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
RNF2Q99496 REXO1L11P-201ENST00000620964 1927 ntBASIC13.8□□□□□ -0.2
RNF2Q99496 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RNF2Q99496 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RNF2Q99496 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF2Q99496 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF2Q99496 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RNF2Q99496 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF2Q99496 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
RNF2Q99496 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF2Q99496 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF2Q99496 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF2Q99496 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF2Q99496 AC022616.7-201ENST00000525383 220 ntBASIC13.79□□□□□ -0.2
RNF2Q99496 LINC01238-205ENST00000567549 1107 ntBASIC13.79□□□□□ -0.2
RNF2Q99496 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF2Q99496 UBALD1-205ENST00000590891 2641 ntBASIC13.79□□□□□ -0.2
RNF2Q99496 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF2Q99496 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF2Q99496 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 AC092850.2-201ENST00000623821 2697 ntBASIC13.79□□□□□ -0.2
RNF2Q99496 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RNF2Q99496 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.79□□□□□ -0.2
RNF2Q99496 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF2Q99496 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF2Q99496 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RNF2Q99496 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF2Q99496 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms