Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.57□□□□□ -0.08
CSMD1Q96PZ7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.57□□□□□ -0.08
CSMD1Q96PZ7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CSMD1Q96PZ7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 AC009407.1-201ENST00000568958 598 ntBASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 COX11-210ENST00000639671 696 ntBASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 AL671277.1-201ENST00000429656 993 ntBASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 AL109936.8-201ENST00000641772 604 ntBASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CSMD1Q96PZ7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 HAUS4P1-201ENST00000406739 1145 ntBASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 INE1-201ENST00000456273 945 ntBASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AL583810.1-201ENST00000553344 1045 ntBASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 GGTLC5P-201ENST00000617623 998 ntBASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AC012313.1-201ENST00000593393 3059 ntBASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 KRT8P44-201ENST00000441609 1350 ntBASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AP000842.3-202ENST00000569238 1080 ntBASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AC140912.1-201ENST00000577171 1054 ntBASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CSMD1Q96PZ7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms