Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLRP3Q96P20 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 AC092474.2-201ENST00000424288 719 ntBASIC21.19■□□□□ 0.98
NLRP3Q96P20 RNA5SP421-201ENST00000516864 134 ntBASIC21.19■□□□□ 0.98
NLRP3Q96P20 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 AL390955.2-201ENST00000603032 514 ntBASIC21.19■□□□□ 0.98
NLRP3Q96P20 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NLRP3Q96P20 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRP3Q96P20 AC012569.1-201ENST00000591191 1524 ntBASIC21.19■□□□□ 0.98
NLRP3Q96P20 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 AL512356.2-201ENST00000546955 174 ntBASIC21.18■□□□□ 0.98
NLRP3Q96P20 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRP3Q96P20 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.18■□□□□ 0.98
NLRP3Q96P20 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 CNN2P2-201ENST00000443536 909 ntBASIC21.17■□□□□ 0.98
NLRP3Q96P20 CNN2P3-201ENST00000450201 906 ntBASIC21.17■□□□□ 0.98
NLRP3Q96P20 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 MIR4745-201ENST00000577608 62 ntBASIC21.17■□□□□ 0.98
NLRP3Q96P20 AL009183.1-201ENST00000603760 355 ntBASIC21.17■□□□□ 0.98
NLRP3Q96P20 AL136317.3-201ENST00000618497 906 ntBASIC21.17■□□□□ 0.98
NLRP3Q96P20 AP001059.3-201ENST00000619053 235 ntBASIC21.17■□□□□ 0.98
NLRP3Q96P20 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 AC012317.2-201ENST00000623305 2251 ntBASIC21.17■□□□□ 0.98
NLRP3Q96P20 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
NLRP3Q96P20 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRP3Q96P20 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NLRP3Q96P20 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms