Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 TUBB8P12-201ENST00000308911 1335 ntBASIC14.88□□□□□ -0.03
CMTM3Q96MX0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 TUBB7P-202ENST00000428444 1305 ntBASIC14.88□□□□□ -0.03
CMTM3Q96MX0 TUBB8P7-204ENST00000567960 1332 ntBASIC14.88□□□□□ -0.03
CMTM3Q96MX0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 AL662844.4-201ENST00000606367 2838 ntBASIC14.88□□□□□ -0.03
CMTM3Q96MX0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
CMTM3Q96MX0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 AC024909.3-201ENST00000611513 2257 ntBASIC14.87□□□□□ -0.03
CMTM3Q96MX0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 TSPY12P-201ENST00000421279 868 ntBASIC14.87□□□□□ -0.03
CMTM3Q96MX0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CMTM3Q96MX0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 FAM201B-201ENST00000458407 597 ntBASIC14.86□□□□□ -0.03
CMTM3Q96MX0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 AL512604.3-201ENST00000569583 964 ntBASIC14.86□□□□□ -0.03
CMTM3Q96MX0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 AP001412.1-201ENST00000608405 714 ntBASIC14.86□□□□□ -0.03
CMTM3Q96MX0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 FRMD8P1-201ENST00000440433 1524 ntBASIC14.86□□□□□ -0.03
CMTM3Q96MX0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CMTM3Q96MX0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 ME2P1-201ENST00000426028 1970 ntBASIC14.85□□□□□ -0.03
CMTM3Q96MX0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.85□□□□□ -0.03
CMTM3Q96MX0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms