Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 TSFM-210ENST00000550559 897 ntTSL 5 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 AP001059.3-201ENST00000619053 235 ntBASIC22.55■■□□□ 1.2
NBPF4Q96M43 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.55■■□□□ 1.2
NBPF4Q96M43 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NBPF4Q96M43 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF4Q96M43 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF4Q96M43 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF4Q96M43 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF4Q96M43 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 AC092474.2-201ENST00000424288 719 ntBASIC22.54■■□□□ 1.2
NBPF4Q96M43 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 MIR4745-201ENST00000577608 62 ntBASIC22.54■■□□□ 1.2
NBPF4Q96M43 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 RAB34-224ENST00000636513 888 ntTSL 5 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF4Q96M43 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF4Q96M43 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF4Q96M43 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 BSG-215ENST00000618006 1329 ntTSL 2 BASIC22.54■■□□□ 1.2
NBPF4Q96M43 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NBPF4Q96M43 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 AC069262.1-201ENST00000539058 672 ntBASIC22.53■■□□□ 1.2
NBPF4Q96M43 AQP6-203ENST00000551733 849 ntTSL 3 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 GREM1-201ENST00000560677 623 ntTSL 4 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 AC138761.1-201ENST00000584393 385 ntBASIC22.53■■□□□ 1.2
NBPF4Q96M43 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NBPF4Q96M43 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.53■■□□□ 1.2
NBPF4Q96M43 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF4Q96M43 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 SLC22A20-204ENST00000530038 1673 ntBASIC22.52■■□□□ 1.2
NBPF4Q96M43 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF4Q96M43 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF4Q96M43 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 SLC25A1P3-201ENST00000395415 828 ntBASIC22.52■■□□□ 1.2
NBPF4Q96M43 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF4Q96M43 RPL30-202ENST00000396070 440 ntTSL 2 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF4Q96M43 AC055876.3-201ENST00000431496 288 ntBASIC22.52■■□□□ 1.2
NBPF4Q96M43 SLC25A6P5-201ENST00000435663 894 ntBASIC22.52■■□□□ 1.2
NBPF4Q96M43 RBPMS2P1-201ENST00000437762 623 ntBASIC22.52■■□□□ 1.2
NBPF4Q96M43 AC067863.1-201ENST00000494933 530 ntBASIC22.52■■□□□ 1.2
NBPF4Q96M43 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
NBPF4Q96M43 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF4Q96M43 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF4Q96M43 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NBPF4Q96M43 AC138649.4-201ENST00000612222 287 ntBASIC22.52■■□□□ 1.2
NBPF4Q96M43 AL161645.1-201ENST00000622716 1255 ntBASIC22.52■■□□□ 1.2
NBPF4Q96M43 AC084121.4-201ENST00000641598 221 ntBASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms