Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 AC092053.1-201ENST00000605787 1936 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CALR3Q96L12 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.29■□□□□ 0.52
CALR3Q96L12 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.29■□□□□ 0.52
CALR3Q96L12 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.29■□□□□ 0.52
CALR3Q96L12 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 AC003669.1-201ENST00000334569 611 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.29■□□□□ 0.52
CALR3Q96L12 AL645929.1-201ENST00000420084 975 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 TSPY22P-201ENST00000427496 604 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.29■□□□□ 0.52
CALR3Q96L12 SPDYE13P-201ENST00000445314 798 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.29■□□□□ 0.52
CALR3Q96L12 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CALR3Q96L12 AC063952.2-201ENST00000498792 1227 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.29■□□□□ 0.52
CALR3Q96L12 AL592071.1-201ENST00000611956 408 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CALR3Q96L12 AC006011.2-201ENST00000621313 1158 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 KRT8P10-201ENST00000450021 1447 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.29■□□□□ 0.52
CALR3Q96L12 AC009336.1-201ENST00000608941 1553 ntBASIC18.29■□□□□ 0.52
CALR3Q96L12 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CALR3Q96L12 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.29■□□□□ 0.52
CALR3Q96L12 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CALR3Q96L12 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.28■□□□□ 0.52
CALR3Q96L12 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.28■□□□□ 0.52
CALR3Q96L12 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.28■□□□□ 0.52
CALR3Q96L12 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.28■□□□□ 0.52
CALR3Q96L12 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.28■□□□□ 0.52
CALR3Q96L12 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.28■□□□□ 0.52
CALR3Q96L12 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CALR3Q96L12 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.28■□□□□ 0.52
CALR3Q96L12 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.28■□□□□ 0.52
CALR3Q96L12 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.28■□□□□ 0.52
CALR3Q96L12 AC083849.1-201ENST00000615227 514 ntBASIC18.28■□□□□ 0.52
CALR3Q96L12 AC124864.1-201ENST00000623408 392 ntBASIC18.28■□□□□ 0.52
CALR3Q96L12 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.28■□□□□ 0.52
CALR3Q96L12 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CALR3Q96L12 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CALR3Q96L12 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.28■□□□□ 0.52
CALR3Q96L12 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.28■□□□□ 0.52
CALR3Q96L12 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.28■□□□□ 0.52
CALR3Q96L12 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CALR3Q96L12 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.28■□□□□ 0.52
CALR3Q96L12 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CALR3Q96L12 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CALR3Q96L12 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.27■□□□□ 0.52
CALR3Q96L12 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CALR3Q96L12 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CALR3Q96L12 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CALR3Q96L12 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 GPR89P-201ENST00000407924 1495 ntBASIC18.27■□□□□ 0.52
CALR3Q96L12 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CALR3Q96L12 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.27■□□□□ 0.52
CALR3Q96L12 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CALR3Q96L12 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.27■□□□□ 0.52
CALR3Q96L12 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.27■□□□□ 0.52
CALR3Q96L12 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.27■□□□□ 0.52
CALR3Q96L12 STK19B-204ENST00000512515 211 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms