Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 UNC93B2-201ENST00000285383 730 ntBASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 SNORA78-201ENST00000459373 127 ntBASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHMP6Q96FZ7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.43■□□□□ 0.38
CHMP6Q96FZ7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 AC008687.5-201ENST00000593746 558 ntBASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHMP6Q96FZ7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms