Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 AC096582.2-201ENST00000510860 516 ntBASIC17.84■□□□□ 0.45
IFT43Q96FT9 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IFT43Q96FT9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 NKILA-202ENST00000614771 2598 ntBASIC17.84■□□□□ 0.45
IFT43Q96FT9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
IFT43Q96FT9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.83■□□□□ 0.45
IFT43Q96FT9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
IFT43Q96FT9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
IFT43Q96FT9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
IFT43Q96FT9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.83■□□□□ 0.44
IFT43Q96FT9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.83■□□□□ 0.44
IFT43Q96FT9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
IFT43Q96FT9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.83■□□□□ 0.44
IFT43Q96FT9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.83■□□□□ 0.44
IFT43Q96FT9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.83■□□□□ 0.44
IFT43Q96FT9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
IFT43Q96FT9 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.83■□□□□ 0.44
IFT43Q96FT9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
IFT43Q96FT9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
IFT43Q96FT9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 AC011676.5-201ENST00000624864 2660 ntBASIC17.82■□□□□ 0.44
IFT43Q96FT9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 AC122714.2-201ENST00000502787 707 ntBASIC17.82■□□□□ 0.44
IFT43Q96FT9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 AF238378.1-201ENST00000526806 358 ntBASIC17.82■□□□□ 0.44
IFT43Q96FT9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.82■□□□□ 0.44
IFT43Q96FT9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
IFT43Q96FT9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms