Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 AL049840.3-201ENST00000602669 611 ntBASIC15.31■□□□□ 0.04
APH1AQ96BI3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 AC004706.3-202ENST00000621574 984 ntBASIC15.31■□□□□ 0.04
APH1AQ96BI3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
APH1AQ96BI3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.31■□□□□ 0.04
APH1AQ96BI3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APH1AQ96BI3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APH1AQ96BI3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APH1AQ96BI3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 RNA5SP419-201ENST00000515908 135 ntBASIC15.3■□□□□ 0.04
APH1AQ96BI3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APH1AQ96BI3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 PGM5P2-202ENST00000637225 1043 ntBASIC15.3■□□□□ 0.04
APH1AQ96BI3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
APH1AQ96BI3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
APH1AQ96BI3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
APH1AQ96BI3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
APH1AQ96BI3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 AC092910.1-201ENST00000482027 1129 ntBASIC15.29■□□□□ 0.04
APH1AQ96BI3 AC136632.2-201ENST00000512891 861 ntBASIC15.29■□□□□ 0.04
APH1AQ96BI3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 AL353135.1-201ENST00000606729 504 ntBASIC15.29■□□□□ 0.04
APH1AQ96BI3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms