Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCAMP4Q969E2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.14■□□□□ 0.33
SCAMP4Q969E2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
SCAMP4Q969E2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
SCAMP4Q969E2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCAMP4Q969E2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.14■□□□□ 0.33
SCAMP4Q969E2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.14■□□□□ 0.33
SCAMP4Q969E2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 AC093525.9-201ENST00000624961 1746 ntBASIC17.13■□□□□ 0.33
SCAMP4Q969E2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 PGM5P2-202ENST00000637225 1043 ntBASIC17.13■□□□□ 0.33
SCAMP4Q969E2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCAMP4Q969E2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 OR6D1P-202ENST00000641007 5290 ntBASIC17.12■□□□□ 0.33
SCAMP4Q969E2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 AC009947.1-201ENST00000444350 727 ntBASIC17.12■□□□□ 0.33
SCAMP4Q969E2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 AC034105.1-201ENST00000563488 319 ntBASIC17.12■□□□□ 0.33
SCAMP4Q969E2 AC145285.3-201ENST00000564603 959 ntBASIC17.12■□□□□ 0.33
SCAMP4Q969E2 AC106730.1-201ENST00000566722 1090 ntBASIC17.12■□□□□ 0.33
SCAMP4Q969E2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 Z83851.2-201ENST00000609564 659 ntBASIC17.12■□□□□ 0.33
SCAMP4Q969E2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 AL805961.1-202ENST00000641562 540 ntBASIC17.12■□□□□ 0.33
SCAMP4Q969E2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 AC116353.5-201ENST00000638148 1699 ntBASIC17.12■□□□□ 0.33
SCAMP4Q969E2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SCAMP4Q969E2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 PI4KAP1-204ENST00000612579 1703 ntBASIC17.11■□□□□ 0.33
SCAMP4Q969E2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 AC108751.1-201ENST00000490852 363 ntBASIC17.11■□□□□ 0.33
SCAMP4Q969E2 IGHV3-65-201ENST00000523210 341 ntBASIC17.11■□□□□ 0.33
SCAMP4Q969E2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 AC008667.4-201ENST00000607370 168 ntBASIC17.11■□□□□ 0.33
SCAMP4Q969E2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCAMP4Q969E2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms