Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
ATP2A3Q93084 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 SIGLEC16-201ENST00000599858 1437 ntBASIC18.23■□□□□ 0.51
ATP2A3Q93084 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A3Q93084 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 SPDYE21P-201ENST00000413323 827 ntBASIC18.22■□□□□ 0.51
ATP2A3Q93084 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 PRYP5-201ENST00000451909 266 ntBASIC18.22■□□□□ 0.51
ATP2A3Q93084 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 AC006557.2-201ENST00000592985 1240 ntBASIC18.22■□□□□ 0.51
ATP2A3Q93084 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 MIR1199-201ENST00000621445 119 ntBASIC18.22■□□□□ 0.51
ATP2A3Q93084 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATP2A3Q93084 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ATP2A3Q93084 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 PRORSD1P-202ENST00000563365 2154 ntBASIC18.21■□□□□ 0.51
ATP2A3Q93084 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 AP002414.3-201ENST00000589352 1468 ntBASIC18.21■□□□□ 0.51
ATP2A3Q93084 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.21■□□□□ 0.51
ATP2A3Q93084 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 AC012317.2-201ENST00000623305 2251 ntBASIC18.21■□□□□ 0.51
ATP2A3Q93084 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ATP2A3Q93084 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATP2A3Q93084 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
ATP2A3Q93084 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 PGAM5P1-201ENST00000518923 814 ntBASIC18.2■□□□□ 0.5
ATP2A3Q93084 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.2■□□□□ 0.5
ATP2A3Q93084 AL356488.2-201ENST00000602755 427 ntBASIC18.2■□□□□ 0.5
ATP2A3Q93084 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 AC073592.5-201ENST00000624854 528 ntBASIC18.2■□□□□ 0.5
ATP2A3Q93084 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms