Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AL137077.2-201ENST00000635124 1608 ntBASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AC092667.1-201ENST00000434301 2586 ntBASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 FLJ13224-201ENST00000313737 1514 ntBASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 KRT90P-201ENST00000549264 1064 ntBASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AL161645.1-201ENST00000622716 1255 ntBASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AL139011.1-202ENST00000642063 584 ntBASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 Z98044.1-201ENST00000632503 1764 ntBASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AC016027.1-202ENST00000607927 1699 ntBASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC6.86□□□□□ -1.31
SYNE2Q8WXH0 AC009336.1-201ENST00000608941 1553 ntBASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AL596276.2-201ENST00000447525 331 ntBASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AC018445.3-201ENST00000624177 1945 ntBASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AL157792.1-201ENST00000488281 530 ntBASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SYNE2Q8WXH0 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms