Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNIH3Q8TBE1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.82■□□□□ 0.12
CNIH3Q8TBE1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNIH3Q8TBE1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
CNIH3Q8TBE1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNIH3Q8TBE1 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNIH3Q8TBE1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CNIH3Q8TBE1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNIH3Q8TBE1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CNIH3Q8TBE1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 PVRIG2P-201ENST00000435460 978 ntBASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 BX088651.1-201ENST00000540551 451 ntBASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 AC124947.2-201ENST00000547118 1133 ntBASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 MIR3917-201ENST00000580971 93 ntBASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 AC023824.1-201ENST00000562945 2975 ntBASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CNIH3Q8TBE1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 ITM2C-210ENST00000620962 501 ntBASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 AL365203.3-201ENST00000609742 2057 ntBASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNIH3Q8TBE1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.79■□□□□ 0.12
CNIH3Q8TBE1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms