Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 AC139887.3-201ENST00000568585 713 ntBASIC18.29■□□□□ 0.52
UBA3Q8TBC4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 AL589182.2-201ENST00000619332 1049 ntBASIC18.29■□□□□ 0.52
UBA3Q8TBC4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 NCF1C-201ENST00000438382 1427 ntBASIC18.29■□□□□ 0.52
UBA3Q8TBC4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
UBA3Q8TBC4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 ACTG1P4-201ENST00000425123 1122 ntBASIC18.28■□□□□ 0.52
UBA3Q8TBC4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 SLC25A6P4-201ENST00000586535 553 ntBASIC18.28■□□□□ 0.52
UBA3Q8TBC4 AL049840.3-201ENST00000602669 611 ntBASIC18.28■□□□□ 0.52
UBA3Q8TBC4 AC107918.4-202ENST00000641623 219 ntBASIC18.28■□□□□ 0.52
UBA3Q8TBC4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBA3Q8TBC4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 AC012640.2-201ENST00000561606 901 ntBASIC18.27■□□□□ 0.52
UBA3Q8TBC4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 AL353135.1-201ENST00000606729 504 ntBASIC18.27■□□□□ 0.52
UBA3Q8TBC4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBA3Q8TBC4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBA3Q8TBC4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBA3Q8TBC4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
UBA3Q8TBC4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBA3Q8TBC4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
UBA3Q8TBC4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
UBA3Q8TBC4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 LTB4R2-202ENST00000528054 3092 ntBASIC18.26■□□□□ 0.51
UBA3Q8TBC4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 AC004706.3-202ENST00000621574 984 ntBASIC18.26■□□□□ 0.51
UBA3Q8TBC4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBA3Q8TBC4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms