Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 MIR1233-1-201ENST00000408722 82 ntBASIC21.49■■□□□ 1.03
LINS1Q8NG48 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 DUX4L17-201ENST00000557360 1267 ntBASIC21.49■■□□□ 1.03
LINS1Q8NG48 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LINS1Q8NG48 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LINS1Q8NG48 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 AC055717.3-201ENST00000622967 595 ntBASIC21.48■■□□□ 1.03
LINS1Q8NG48 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 FRMD8P1-201ENST00000440433 1524 ntBASIC21.48■■□□□ 1.03
LINS1Q8NG48 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LINS1Q8NG48 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LINS1Q8NG48 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LINS1Q8NG48 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINS1Q8NG48 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINS1Q8NG48 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINS1Q8NG48 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINS1Q8NG48 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINS1Q8NG48 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 MIR3687-2-201ENST00000577708 61 ntBASIC21.47■■□□□ 1.03
LINS1Q8NG48 MIR3687-1-201ENST00000614492 61 ntBASIC21.47■■□□□ 1.03
LINS1Q8NG48 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINS1Q8NG48 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINS1Q8NG48 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LINS1Q8NG48 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LINS1Q8NG48 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 LINC02012-201ENST00000608206 1725 ntBASIC21.46■■□□□ 1.03
LINS1Q8NG48 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 AL513480.1-201ENST00000451731 511 ntBASIC21.46■■□□□ 1.03
LINS1Q8NG48 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.46■■□□□ 1.03
LINS1Q8NG48 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LINS1Q8NG48 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms