Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLDN22Q8N7P3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 AC092053.1-201ENST00000605787 1936 ntBASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 AC007967.3-201ENST00000434308 558 ntBASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLDN22Q8N7P3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 AL031133.1-201ENST00000406807 723 ntBASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 LINC01238-205ENST00000567549 1107 ntBASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 AC109462.3-201ENST00000573934 613 ntBASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 AC011498.5-201ENST00000592027 486 ntBASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.74■□□□□ 0.11
CLDN22Q8N7P3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 AL845331.1-201ENST00000424978 1190 ntBASIC15.73■□□□□ 0.11
CLDN22Q8N7P3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms