Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.05■□□□□ 0.16
BEST3Q8N1M1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 PGAM5P1-201ENST00000518923 814 ntBASIC16.05■□□□□ 0.16
BEST3Q8N1M1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 AL139424.1-201ENST00000607572 797 ntBASIC16.05■□□□□ 0.16
BEST3Q8N1M1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.05■□□□□ 0.16
BEST3Q8N1M1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 AC097637.2-201ENST00000624096 1997 ntBASIC16.04■□□□□ 0.16
BEST3Q8N1M1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 AC005104.2-201ENST00000427818 678 ntBASIC16.04■□□□□ 0.16
BEST3Q8N1M1 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 RNA5SP416-201ENST00000516838 111 ntBASIC16.04■□□□□ 0.16
BEST3Q8N1M1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.04■□□□□ 0.16
BEST3Q8N1M1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.03■□□□□ 0.16
BEST3Q8N1M1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms