Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 SIGLEC30P-201ENST00000455569 941 ntBASIC18.74■□□□□ 0.59
VPS52Q8N1B4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 MIR4751-201ENST00000578027 74 ntBASIC18.74■□□□□ 0.59
VPS52Q8N1B4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 AL355385.1-201ENST00000606123 409 ntBASIC18.74■□□□□ 0.59
VPS52Q8N1B4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
VPS52Q8N1B4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 HMGN1P19-201ENST00000436976 333 ntBASIC18.73■□□□□ 0.59
VPS52Q8N1B4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 AC108073.2-201ENST00000464002 357 ntBASIC18.73■□□□□ 0.59
VPS52Q8N1B4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 AC005829.1-201ENST00000570002 483 ntBASIC18.73■□□□□ 0.59
VPS52Q8N1B4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 FLJ13224-201ENST00000313737 1514 ntBASIC18.73■□□□□ 0.59
VPS52Q8N1B4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
VPS52Q8N1B4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 AC002310.6-201ENST00000624451 1377 ntBASIC18.72■□□□□ 0.59
VPS52Q8N1B4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 AC003669.1-201ENST00000334569 611 ntBASIC18.72■□□□□ 0.59
VPS52Q8N1B4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 SLC25A6P5-201ENST00000435663 894 ntBASIC18.72■□□□□ 0.59
VPS52Q8N1B4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 VN2R19P-201ENST00000442399 1052 ntBASIC18.72■□□□□ 0.59
VPS52Q8N1B4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 AC092865.6-201ENST00000642101 219 ntBASIC18.72■□□□□ 0.59
VPS52Q8N1B4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VPS52Q8N1B4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms