Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 AC012317.2-201ENST00000623305 2251 ntBASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 MIR346-201ENST00000362234 95 ntBASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COL27A1Q8IZC6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 AC241585.1-201ENST00000433527 519 ntBASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 GAPDHP21-201ENST00000450301 1010 ntBASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 IGHV3-42-201ENST00000520410 361 ntBASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 AC105233.2-201ENST00000523697 349 ntBASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 AF228730.5-201ENST00000530288 346 ntBASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 AC073389.1-201ENST00000595595 795 ntBASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 AL138828.2-201ENST00000615812 383 ntBASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COL27A1Q8IZC6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 MIR4492-201ENST00000581627 80 ntBASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 LINC00896-202ENST00000609602 2128 ntBASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 COX5BP8-201ENST00000416911 349 ntBASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 RN7SL692P-201ENST00000464677 288 ntBASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 AL138918.1-201ENST00000568306 659 ntBASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 AC073592.8-201ENST00000624126 511 ntBASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
COL27A1Q8IZC6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 AC022144.1-201ENST00000602255 1580 ntBASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL27A1Q8IZC6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms