Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SCN4BQ8IWT1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 MRPL20P1-201ENST00000400819 433 ntBASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 BX842568.4-201ENST00000421222 227 ntBASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 VN2R19P-201ENST00000442399 1052 ntBASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 AL133373.2-201ENST00000623187 2828 ntBASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 GNAS-203ENST00000306120 1878 ntBASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SCN4BQ8IWT1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 AC023274.1-201ENST00000418278 595 ntBASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 GGTLC5P-201ENST00000617623 998 ntBASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SCN4BQ8IWT1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 RNF165-205ENST00000588679 2904 ntBASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 KRT18P2-201ENST00000447938 1258 ntBASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SCN4BQ8IWT1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SCN4BQ8IWT1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms