Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC25Q86WR0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC25Q86WR0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC25Q86WR0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC25Q86WR0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC25Q86WR0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC25Q86WR0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.89■□□□□ 0.45
CCDC25Q86WR0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC25Q86WR0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 RASA4DP-201ENST00000460726 1199 ntBASIC17.88■□□□□ 0.45
CCDC25Q86WR0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 AL023973.1-201ENST00000624619 620 ntBASIC17.88■□□□□ 0.45
CCDC25Q86WR0 AC141257.4-201ENST00000634557 245 ntBASIC17.88■□□□□ 0.45
CCDC25Q86WR0 AC136944.6-201ENST00000634818 245 ntBASIC17.88■□□□□ 0.45
CCDC25Q86WR0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC25Q86WR0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 SLC25A1P3-201ENST00000395415 828 ntBASIC17.87■□□□□ 0.45
CCDC25Q86WR0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 AC092068.3-201ENST00000587894 2016 ntBASIC17.87■□□□□ 0.45
CCDC25Q86WR0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC25Q86WR0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 AC078925.2-201ENST00000624013 1973 ntBASIC17.86■□□□□ 0.45
CCDC25Q86WR0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC25Q86WR0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms