Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SPDYE12P-201ENST00000618416 771 ntBASIC11.87□□□□□ -0.51
CSMD3Q7Z407 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 AL009183.1-201ENST00000603760 355 ntBASIC11.87□□□□□ -0.51
CSMD3Q7Z407 AC009118.2-201ENST00000613275 655 ntBASIC11.87□□□□□ -0.51
CSMD3Q7Z407 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CSMD3Q7Z407 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 MIR6080-201ENST00000617359 66 ntBASIC11.86□□□□□ -0.51
CSMD3Q7Z407 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 AL162274.1-201ENST00000617191 1098 ntBASIC11.86□□□□□ -0.51
CSMD3Q7Z407 AL161645.1-201ENST00000622716 1255 ntBASIC11.86□□□□□ -0.51
CSMD3Q7Z407 AC004840.1-201ENST00000636359 365 ntBASIC11.86□□□□□ -0.51
CSMD3Q7Z407 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CSMD3Q7Z407 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 AC106886.1-201ENST00000568660 600 ntBASIC11.85□□□□□ -0.51
CSMD3Q7Z407 AC132938.2-201ENST00000579188 680 ntBASIC11.85□□□□□ -0.51
CSMD3Q7Z407 MIR3909-201ENST00000579518 119 ntBASIC11.85□□□□□ -0.51
CSMD3Q7Z407 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 AL591163.1-201ENST00000641757 987 ntBASIC11.85□□□□□ -0.51
CSMD3Q7Z407 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 AC112492.5-201ENST00000421897 457 ntBASIC11.85□□□□□ -0.51
CSMD3Q7Z407 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
CSMD3Q7Z407 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms