Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 AL135999.2-201ENST00000622438 1686 ntBASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 KLF4P1-201ENST00000412782 1185 ntBASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 MIR5100-201ENST00000579544 119 ntBASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HIST2H3AQ71DI3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HIST2H3AQ71DI3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 PCDHA12-202ENST00000613593 2588 ntBASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HIST2H3AQ71DI3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms